J3_3J28_012

3D structure

PDB id

3J28 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

12.9 Å

Loop

Sequence

UA*UACCGGUGG*CGG

Length

14 nucleotides

Bulged bases

3J28|1|N|U|723

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J28|1|N|U|672
3J28|1|N|A|673
*
3J28|1|N|U|717
3J28|1|N|A|718
3J28|1|N|C|719
3J28|1|N|C|720
3J28|1|N|G|721
3J28|1|N|G|722
3J28|1|N|U|723
3J28|1|N|G|724
3J28|1|N|G|725
*
3J28|1|N|C|732
3J28|1|N|G|733
3J28|1|N|G|734

Current chains

Chain N

16S rRNA

Nearby chains