J3_3J28_015

3D structure

PDB id

3J28 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

12.9 Å

Loop

Sequence

ACUUG*CGGAG*CGUUAAGU

Length

18 nucleotides

Bulged bases

3J28|1|N|U|871, 3J28|1|N|A|873

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J28|1|N|A|825
3J28|1|N|C|826
3J28|1|N|U|827
3J28|1|N|U|828
3J28|1|N|G|829
*
3J28|1|N|C|857
3J28|1|N|G|858
3J28|1|N|G|859
3J28|1|N|A|860
3J28|1|N|G|861
*
3J28|1|N|C|868
3J28|1|N|G|869
3J28|1|N|U|870
3J28|1|N|U|871
3J28|1|N|A|872
3J28|1|N|A|873
3J28|1|N|G|874
3J28|1|N|U|875

Current chains

Chain N

16S rRNA

Nearby chains