J3_3J28_019

3D structure

PDB id

3J28 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

12.9 Å

Loop

Sequence

UAU*AGACUGCC*GGAGGAAGGUG

Length

22 nucleotides

Bulged bases

3J28|1|N|U|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J28|1|N|U|1116
3J28|1|N|A|1117
3J28|1|N|U|1118
*
3J28|1|N|A|1155
3J28|1|N|G|1156
3J28|1|N|A|1157
3J28|1|N|C|1158
3J28|1|N|U|1159
3J28|1|N|G|1160
3J28|1|N|C|1161
3J28|1|N|C|1162
*
3J28|1|N|G|1174
3J28|1|N|G|1175
3J28|1|N|A|1176
3J28|1|N|G|1177
3J28|1|N|G|1178
3J28|1|N|A|1179
3J28|1|N|A|1180
3J28|1|N|G|1181
3J28|1|N|G|1182
3J28|1|N|U|1183
3J28|1|N|G|1184

Current chains

Chain N

16S rRNA

Nearby chains