J3_3J28_023

3D structure

PDB id

3J28 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

12.9 Å

Loop

Sequence

GUCGUCAG*CGCAACC*GAUGACGUC

Length

24 nucleotides

Bulged bases

3J28|1|N|U|1189, 3J28|1|N|G|1190

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J28|1|N|G|1061
3J28|1|N|U|1062
3J28|1|N|C|1063
3J28|1|N|G|1064
3J28|1|N|U|1065
3J28|1|N|C|1066
3J28|1|N|A|1067
3J28|1|N|G|1068
*
3J28|1|N|C|1107
3J28|1|N|G|1108
3J28|1|N|C|1109
3J28|1|N|A|1110
3J28|1|N|A|1111
3J28|1|N|C|1112
3J28|1|N|C|1113
*
3J28|1|N|G|1187
3J28|1|N|A|1188
3J28|1|N|U|1189
3J28|1|N|G|1190
3J28|1|N|A|1191
3J28|1|N|C|1192
3J28|1|N|G|1193
3J28|1|N|U|1194
3J28|1|N|C|1195

Current chains

Chain N

16S rRNA

Nearby chains