J3_3J29_015

3D structure

PDB id

3J29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

14 Å

Loop

Sequence

GUGGUUUAAUUC*GAAGAACCUUACC*GGGCUACACAC

Length

36 nucleotides

Bulged bases

3J29|1|N|A|975, 3J29|1|N|G|976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J29|1|N|G|951
3J29|1|N|U|952
3J29|1|N|G|953
3J29|1|N|G|954
3J29|1|N|U|955
3J29|1|N|U|956
3J29|1|N|U|957
3J29|1|N|A|958
3J29|1|N|A|959
3J29|1|N|U|960
3J29|1|N|U|961
3J29|1|N|C|962
*
3J29|1|N|G|973
3J29|1|N|A|974
3J29|1|N|A|975
3J29|1|N|G|976
3J29|1|N|A|977
3J29|1|N|A|978
3J29|1|N|C|979
3J29|1|N|C|980
3J29|1|N|U|981
3J29|1|N|U|982
3J29|1|N|A|983
3J29|1|N|C|984
3J29|1|N|C|985
*
3J29|1|N|G|1220
3J29|1|N|G|1221
3J29|1|N|G|1222
3J29|1|N|C|1223
3J29|1|N|U|1224
3J29|1|N|A|1225
3J29|1|N|C|1226
3J29|1|N|A|1227
3J29|1|N|C|1228
3J29|1|N|A|1229
3J29|1|N|C|1230

Current chains

Chain N

16S rRNA

Nearby chains