J3_3J2B_008

3D structure

PDB id

3J2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UGUCGUCAG*CGCAACCC*GGAUGACGUCAA

Length

29 nucleotides

Bulged bases

3J2B|1|N|G|1190, 3J2B|1|N|U|1194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J2B|1|N|U|1060
3J2B|1|N|G|1061
3J2B|1|N|U|1062
3J2B|1|N|C|1063
3J2B|1|N|G|1064
3J2B|1|N|U|1065
3J2B|1|N|C|1066
3J2B|1|N|A|1067
3J2B|1|N|G|1068
*
3J2B|1|N|C|1107
3J2B|1|N|G|1108
3J2B|1|N|C|1109
3J2B|1|N|A|1110
3J2B|1|N|A|1111
3J2B|1|N|C|1112
3J2B|1|N|C|1113
3J2B|1|N|C|1114
*
3J2B|1|N|G|1186
3J2B|1|N|G|1187
3J2B|1|N|A|1188
3J2B|1|N|U|1189
3J2B|1|N|G|1190
3J2B|1|N|A|1191
3J2B|1|N|C|1192
3J2B|1|N|G|1193
3J2B|1|N|U|1194
3J2B|1|N|C|1195
3J2B|1|N|A|1196
3J2B|1|N|A|1197

Current chains

Chain N

16S rRNA

Nearby chains