J3_3J2B_014

3D structure

PDB id

3J2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UGGA*UAC*GGAA

Length

11 nucleotides

Bulged bases

3J2B|1|N|G|1338

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3J2B_014 not in the Motif Atlas

Homologous match to J3_6CZR_019

Geometric discrepancy: 0.5119

The information below is about J3_6CZR_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J2B|1|N|U|943
3J2B|1|N|G|944
3J2B|1|N|G|945
3J2B|1|N|A|946
*
3J2B|1|N|U|1235
3J2B|1|N|A|1236
3J2B|1|N|C|1237
*
3J2B|1|N|G|1337
3J2B|1|N|G|1338
3J2B|1|N|A|1339
3J2B|1|N|A|1340

Current chains

Chain N

16S rRNA

Nearby chains