J3_3J2B_019

3D structure

PDB id

3J2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

CAAUG*CGUAGUCCGGAUU*AUGAAGUCG

Length

27 nucleotides

Bulged bases

3J2B|1|N|U|1240, 3J2B|1|N|U|1298

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J2B|1|N|C|1237
3J2B|1|N|A|1238
3J2B|1|N|A|1239
3J2B|1|N|U|1240
3J2B|1|N|G|1241
*
3J2B|1|N|C|1296
3J2B|1|N|G|1297
3J2B|1|N|U|1298
3J2B|1|N|A|1299
3J2B|1|N|G|1300
3J2B|1|N|U|1301
3J2B|1|N|C|1302
3J2B|1|N|C|1303
3J2B|1|N|G|1304
3J2B|1|N|G|1305
3J2B|1|N|A|1306
3J2B|1|N|U|1307
3J2B|1|N|U|1308
*
3J2B|1|N|A|1329
3J2B|1|N|U|1330
3J2B|1|N|G|1331
3J2B|1|N|A|1332
3J2B|1|N|A|1333
3J2B|1|N|G|1334
3J2B|1|N|U|1335
3J2B|1|N|C|1336
3J2B|1|N|G|1337

Current chains

Chain N

16S rRNA

Nearby chains