J3_3J2C_009

3D structure

PDB id

3J2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

UG*UGUUG*CGCAA

Length

12 nucleotides

Bulged bases

3J2C|1|M|C|1100

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J2C|1|M|U|1073
3J2C|1|M|G|1074
*
3J2C|1|M|U|1083
3J2C|1|M|G|1084
3J2C|1|M|U|1085
3J2C|1|M|U|1086
3J2C|1|M|G|1087
*
3J2C|1|M|C|1098
3J2C|1|M|G|1099
3J2C|1|M|C|1100
3J2C|1|M|A|1101
3J2C|1|M|A|1102

Current chains

Chain M

16S rRNA head domain

Nearby chains

Chain N

Small subunit ribosomal RNA; SSU rRNA

Chain O

Small subunit ribosomal RNA fragment; SSU rRNA fragment