J3_3J2C_019

3D structure

PDB id

3J2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

GUGGA*UAC*GGAAU

Length

13 nucleotides

Bulged bases

3J2C|1|M|G|1338

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3J2C_019 not in the Motif Atlas

Homologous match to J3_6CZR_019

Geometric discrepancy: 0.5737

The information below is about J3_6CZR_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J2C|1|M|G|942
3J2C|1|M|U|943
3J2C|1|M|G|944
3J2C|1|M|G|945
3J2C|1|M|A|946
*
3J2C|1|M|U|1235
3J2C|1|M|A|1236
3J2C|1|M|C|1237
*
3J2C|1|M|G|1337
3J2C|1|M|G|1338
3J2C|1|M|A|1339
3J2C|1|M|A|1340
3J2C|1|M|U|1341

Current chains

Chain M

16S rRNA head domain

Nearby chains