J3_3J2D_014

3D structure

PDB id

3J2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

18.7 Å

Loop

Sequence

GUAGAAU*GGAAUACCGGUGG*CGGC

Length

24 nucleotides

Bulged bases

3J2D|1|N|G|721, 3J2D|1|N|U|723

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J2D|1|N|G|671
3J2D|1|N|U|672
3J2D|1|N|A|673
3J2D|1|N|G|674
3J2D|1|N|A|675
3J2D|1|N|A|676
3J2D|1|N|U|677
*
3J2D|1|N|G|713
3J2D|1|N|G|714
3J2D|1|N|A|715
3J2D|1|N|A|716
3J2D|1|N|U|717
3J2D|1|N|A|718
3J2D|1|N|C|719
3J2D|1|N|C|720
3J2D|1|N|G|721
3J2D|1|N|G|722
3J2D|1|N|U|723
3J2D|1|N|G|724
3J2D|1|N|G|725
*
3J2D|1|N|C|732
3J2D|1|N|G|733
3J2D|1|N|G|734
3J2D|1|N|C|735

Current chains

Chain N

16S rRNA

Nearby chains