J3_3J2D_023

3D structure

PDB id

3J2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

18.7 Å

Loop

Sequence

GUGGUUUAAUUC*GAAGAACCUUAC*GGCUACACAC

Length

34 nucleotides

Bulged bases

3J2D|1|N|A|975, 3J2D|1|N|G|976

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J2D|1|N|G|951
3J2D|1|N|U|952
3J2D|1|N|G|953
3J2D|1|N|G|954
3J2D|1|N|U|955
3J2D|1|N|U|956
3J2D|1|N|U|957
3J2D|1|N|A|958
3J2D|1|N|A|959
3J2D|1|N|U|960
3J2D|1|N|U|961
3J2D|1|N|C|962
*
3J2D|1|N|G|973
3J2D|1|N|A|974
3J2D|1|N|A|975
3J2D|1|N|G|976
3J2D|1|N|A|977
3J2D|1|N|A|978
3J2D|1|N|C|979
3J2D|1|N|C|980
3J2D|1|N|U|981
3J2D|1|N|U|982
3J2D|1|N|A|983
3J2D|1|N|C|984
*
3J2D|1|N|G|1221
3J2D|1|N|G|1222
3J2D|1|N|C|1223
3J2D|1|N|U|1224
3J2D|1|N|A|1225
3J2D|1|N|C|1226
3J2D|1|N|A|1227
3J2D|1|N|C|1228
3J2D|1|N|A|1229
3J2D|1|N|C|1230

Current chains

Chain N

16S rRNA

Nearby chains