J3_3J73_004

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GACGGUGGC*GAAUCCGCUAAGG*CAC

Length

25 nucleotides

Bulged bases

3J73|1|5|U|1974, 3J73|1|5|G|1975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|G|1969
3J73|1|5|A|1970
3J73|1|5|C|1971
3J73|1|5|G|1972
3J73|1|5|G|1973
3J73|1|5|U|1974
3J73|1|5|G|1975
3J73|1|5|G|1976
3J73|1|5|C|1977
*
3J73|1|5|G|1989
3J73|1|5|A|1990
3J73|1|5|A|1991
3J73|1|5|U|1992
3J73|1|5|C|1993
3J73|1|5|C|1994
3J73|1|5|G|1995
3J73|1|5|C|1996
3J73|1|5|U|1997
3J73|1|5|A|1998
3J73|1|5|A|1999
3J73|1|5|G|2000
3J73|1|5|G|2001
*
3J73|1|5|C|2016
3J73|1|5|A|2017
3J73|1|5|C|2018

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

Ribosomal protein uL16