J3_3J73_028

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCAU*GCUUCUGGG*CACAAGGG

Length

21 nucleotides

Bulged bases

3J73|1|5|C|4990, 3J73|1|5|A|5061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|C|4969
3J73|1|5|C|4970
3J73|1|5|A|4971
3J73|1|5|U|4972
*
3J73|1|5|G|4986
3J73|1|5|C|4987
3J73|1|5|U|4988
3J73|1|5|U|4989
3J73|1|5|C|4990
3J73|1|5|U|4991
3J73|1|5|G|4992
3J73|1|5|G|4993
3J73|1|5|G|4994
*
3J73|1|5|C|5057
3J73|1|5|A|5058
3J73|1|5|C|5059
3J73|1|5|A|5060
3J73|1|5|A|5061
3J73|1|5|G|5062
3J73|1|5|G|5063
3J73|1|5|G|5064

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein uL3

Chain P

Ribosomal protein uL22

Chain d

Ribosomal protein eL31