J3_3J74_026

3D structure

PDB id

3J74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCGGUUG*CCUUCGUCCU*GUCACGCACGCCGUUCGUGG

Length

37 nucleotides

Bulged bases

3J74|1|5|C|4883, 3J74|1|5|C|4937, 3J74|1|5|C|4939, 3J74|1|5|C|4944, 3J74|1|5|G|4945, 3J74|1|5|G|4951

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J74|1|5|U|4748
3J74|1|5|C|4749
3J74|1|5|G|4750
3J74|1|5|G|4751
3J74|1|5|U|4752
3J74|1|5|U|4753
3J74|1|5|G|4754
*
3J74|1|5|C|4879
3J74|1|5|C|4880
3J74|1|5|U|4881
3J74|1|5|U|4882
3J74|1|5|C|4883
3J74|1|5|G|4884
3J74|1|5|U|4885
3J74|1|5|C|4886
3J74|1|5|C|4887
3J74|1|5|U|4888
*
3J74|1|5|G|4931
3J74|1|5|U|4932
3J74|1|5|C|4933
3J74|1|5|A|4934
3J74|1|5|C|4935
3J74|1|5|G|4936
3J74|1|5|C|4937
3J74|1|5|A|4938
3J74|1|5|C|4939
3J74|1|5|G|4941
3J74|1|5|C|4942
3J74|1|5|C|4944
3J74|1|5|G|4945
3J74|1|5|U|4946
3J74|1|5|U|4947
3J74|1|5|C|4948
3J74|1|5|G|4949
3J74|1|5|U|4950
3J74|1|5|G|4951
3J74|1|5|G|4952

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

Ribosomal protein eL6

Chain M

Ribosomal protein eL14

Chain O

Ribosomal protein uL13

Chain f

Ribosomal protein eL33