J3_3J78_022
3D structure
- PDB id
- 3J78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- GAAAG*CUGAUAAC*GUC
- Length
- 16 nucleotides
- Bulged bases
- 3J78|1|2S|U|1840, 3J78|1|2S|A|1841
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J78|1|2S|G|1488
3J78|1|2S|A|1489
3J78|1|2S|A|1490
3J78|1|2S|A|1491
3J78|1|2S|G|1492
*
3J78|1|2S|C|1836
3J78|1|2S|U|1837
3J78|1|2S|G|1838
3J78|1|2S|A|1839
3J78|1|2S|U|1840
3J78|1|2S|A|1841
3J78|1|2S|A|1842
3J78|1|2S|C|1843
*
3J78|1|2S|G|1852
3J78|1|2S|U|1853
3J78|1|2S|C|1854
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 84
- 60S ribosomal protein L34
- Chain 87
- 60S ribosomal protein L37
- Chain 89
- 60S ribosomal protein L39
- Chain 8S
- 5.8S ribosomal RNA; 5.8S rRNA
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