3D structure

PDB id
3J79 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UUAG*CGG*CUA
Length
10 nucleotides
Bulged bases
3J79|1|A|U|1774
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J79|1|A|U|1773
3J79|1|A|U|1774
3J79|1|A|A|1779
3J79|1|A|G|1780
*
3J79|1|A|C|2033
3J79|1|A|G|2034
3J79|1|A|G|2035
*
3J79|1|A|C|2074
3J79|1|A|U|2075
3J79|1|A|A|2079

Current chains

Chain A
28S ribosomal RNA

Nearby chains

Chain 1
60S ribosomal protein eL27

Coloring options:

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