J3_3J79_015
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUAUAA*UUGAACUC*GUA
- Length
- 18 nucleotides
- Bulged bases
- 3J79|1|A|U|1855, 3J79|1|A|U|1965
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J79|1|A|U|1854
3J79|1|A|U|1855
3J79|1|A|U|1856
3J79|1|A|A|1857
3J79|1|A|U|1858
3J79|1|A|A|1859
3J79|1|A|A|1860
*
3J79|1|A|U|1898
3J79|1|A|U|1899
3J79|1|A|G|1900
3J79|1|A|A|1901
3J79|1|A|A|1902
3J79|1|A|C|1903
3J79|1|A|U|1904
3J79|1|A|C|1905
*
3J79|1|A|G|1964
3J79|1|A|U|1965
3J79|1|A|A|1966
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain a
- 60S ribosomal protein eL34
- Chain d
- 60S ribosomal protein eL38
Coloring options: