J3_3J7P_001

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAGCG*CGUACG*CGG

Length

14 nucleotides

Bulged bases

3J7P|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7P|1|5|C|112
3J7P|1|5|A|113
3J7P|1|5|G|114
3J7P|1|5|C|115
3J7P|1|5|G|116
*
3J7P|1|5|C|155
3J7P|1|5|G|156
3J7P|1|5|U|157
3J7P|1|5|A|158
3J7P|1|5|C|159
3J7P|1|5|G|160
*
3J7P|1|5|C|276
3J7P|1|5|G|277
3J7P|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

Ribosomal protein eL8

Chain L

Ribosomal protein eL13

Chain N

Ribosomal protein eL15

Chain h

Ribosomal protein uL29

Chain i

Ribosomal protein eL36