J3_3J7P_010

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCACGG*CUGAC*GGACAGUGC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7P|1|5|G|3934
3J7P|1|5|C|3935
3J7P|1|5|A|3936
3J7P|1|5|C|3937
3J7P|1|5|G|3938
3J7P|1|5|G|3939
*
3J7P|1|5|C|4074
3J7P|1|5|U|4075
3J7P|1|5|G|4076
3J7P|1|5|A|4077
3J7P|1|5|C|4078
*
3J7P|1|5|G|4168
3J7P|1|5|G|4169
3J7P|1|5|A|4170
3J7P|1|5|C|4171
3J7P|1|5|A|4172
3J7P|1|5|G|4173
3J7P|1|5|U|4174
3J7P|1|5|G|4175
3J7P|1|5|C|4176

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain A

Ribosomal protein uL2

Chain G

Ribosomal protein eL8

Chain N

Ribosomal protein eL15

Chain i

Ribosomal protein eL36