J3_3J7P_012

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

3J7P|1|5|C|4990, 3J7P|1|5|A|5061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7P|1|5|C|4970
3J7P|1|5|A|4971
3J7P|1|5|U|4972
*
3J7P|1|5|G|4986
3J7P|1|5|C|4987
3J7P|1|5|U|4988
3J7P|1|5|U|4989
3J7P|1|5|C|4990
3J7P|1|5|U|4991
*
3J7P|1|5|A|5060
3J7P|1|5|A|5061
3J7P|1|5|G|5062
3J7P|1|5|G|5063

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein uL3

Chain P

Ribosomal protein uL22

Chain d

Ribosomal protein eL31