3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GGUCCGCGCAGUCCGCC*GGCGGUGC*GACGUCGGCUAC
Length
37 nucleotides
Bulged bases
3J7P|1|5|G|703
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7P|1|5|G|443
3J7P|1|5|G|444
3J7P|1|5|U|445
3J7P|1|5|C|446
3J7P|1|5|C|447
3J7P|1|5|G|448
3J7P|1|5|C|449
3J7P|1|5|G|450
3J7P|1|5|C|451
3J7P|1|5|A|452
3J7P|1|5|G|453
3J7P|1|5|U|454
3J7P|1|5|C|455
3J7P|1|5|C|456
3J7P|1|5|G|457
3J7P|1|5|C|458
3J7P|1|5|C|459
*
3J7P|1|5|G|697
3J7P|1|5|G|698
3J7P|1|5|C|699
3J7P|1|5|G|700
3J7P|1|5|G|701
3J7P|1|5|U|702
3J7P|1|5|G|703
3J7P|1|5|C|704
*
3J7P|1|5|G|1293
3J7P|1|5|A|1294
3J7P|1|5|C|1295
3J7P|1|5|G|1296
3J7P|1|5|U|1297
3J7P|1|5|C|1298
3J7P|1|5|G|1299
3J7P|1|5|G|1300
3J7P|1|5|C|1301
3J7P|1|5|U|1302
3J7P|1|5|A|1303
3J7P|1|5|C|1304

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain 8
5.8S ribosomal RNA; 5.8S rRNA
Chain E
Ribosomal protein eL6
Chain e
Ribosomal protein eL32
Chain f
Ribosomal protein eL33
Chain r
Ribosomal protein eL28

Coloring options:

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