3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GGAGAUGG*CCAGU*AGGGUGUAAAUCUC
Length
27 nucleotides
Bulged bases
3J7P|1|5|C|2768
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7P|1|5|G|2549
3J7P|1|5|G|2550
3J7P|1|5|A|2551
3J7P|1|5|G|2552
3J7P|1|5|A|2553
3J7P|1|5|U|2554
3J7P|1|5|G|2555
3J7P|1|5|G|2556
*
3J7P|1|5|C|2571
3J7P|1|5|C|2572
3J7P|1|5|A|2573
3J7P|1|5|G|2574
3J7P|1|5|U|2575
*
3J7P|1|5|A|2757
3J7P|1|5|G|2758
3J7P|1|5|G|2759
3J7P|1|5|G|2760
3J7P|1|5|U|2761
3J7P|1|5|G|2762
3J7P|1|5|U|2763
3J7P|1|5|A|2764
3J7P|1|5|A|2765
3J7P|1|5|A|2766
3J7P|1|5|U|2767
3J7P|1|5|C|2768
3J7P|1|5|U|2769
3J7P|1|5|C|2770

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain Z
Ribosomal protein eL27
Chain g
Ribosomal protein eL34

Coloring options:

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