J3_3J8G_003

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3J8G_003 not in the Motif Atlas

Homologous match to J3_5J7L_039

Geometric discrepancy: 0.1797

The information below is about J3_5J7L_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.7

Basepair signature

cWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

3J8G|1|B|C|698
3J8G|1|B|A|699
3J8G|1|B|G|700
*
3J8G|1|B|C|732
3J8G|1|B|G|733
3J8G|1|B|A|734
3J8G|1|B|A|735
3J8G|1|B|C|736
*
3J8G|1|B|G|760
3J8G|1|B|A|761
3J8G|1|B|U|762
3J8G|1|B|G|763

Current chains

Chain B

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2