3D structure

PDB id
3J8G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
5 Å

Loop

Sequence
CAGGA*UUUAAAG*CACUG
Length
17 nucleotides
Bulged bases
3J8G|1|B|A|1084
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J8G|1|B|C|1053
3J8G|1|B|A|1054
3J8G|1|B|G|1055
3J8G|1|B|G|1056
3J8G|1|B|A|1057
*
3J8G|1|B|U|1081
3J8G|1|B|U|1082
3J8G|1|B|U|1083
3J8G|1|B|A|1084
3J8G|1|B|A|1085
3J8G|1|B|A|1086
3J8G|1|B|G|1087
*
3J8G|1|B|C|1102
3J8G|1|B|A|1103
3J8G|1|B|C|1104
3J8G|1|B|U|1105
3J8G|1|B|G|1106

Current chains

Chain B
23S rRNA

Nearby chains

Chain 8
50S ribosomal protein L36
Chain I
50S ribosomal protein L11

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1388 s