J3_3J8G_022
3D structure
- PDB id
- 3J8G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GCA*UCAUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 3J8G|1|B|A|2388, 3J8G|1|B|U|2390, 3J8G|1|B|U|2423, 3J8G|1|B|A|2426
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3J8G_022 not in the Motif Atlas
- Homologous match to J3_5J7L_070
- Geometric discrepancy: 0.242
- The information below is about J3_5J7L_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_20992.1
- Basepair signature
- cWW-F-F-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
3J8G|1|B|G|2282
3J8G|1|B|C|2283
3J8G|1|B|A|2284
*
3J8G|1|B|U|2384
3J8G|1|B|C|2385
3J8G|1|B|A|2386
3J8G|1|B|U|2387
3J8G|1|B|A|2388
3J8G|1|B|G|2389
3J8G|1|B|U|2390
3J8G|1|B|G|2391
3J8G|1|B|A|2392
3J8G|1|B|U|2393
3J8G|1|B|C|2394
3J8G|1|B|C|2395
*
3J8G|1|B|G|2421
3J8G|1|B|C|2422
3J8G|1|B|U|2423
3J8G|1|B|C|2424
3J8G|1|B|A|2425
3J8G|1|B|A|2426
3J8G|1|B|C|2427
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L35
- Chain L
- 50S ribosomal protein L15
- Chain X
- GTPase Der
- Chain Y
- 50S ribosomal protein L27
Coloring options: