J3_3J92_003

3D structure

PDB id

3J92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure and assembly pathway of the ribosome quality control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCGCAGUCC*GGUGC*GACGUC

Length

20 nucleotides

Bulged bases

3J92|1|5|G|703

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J92|1|5|G|448
3J92|1|5|C|449
3J92|1|5|G|450
3J92|1|5|C|451
3J92|1|5|A|452
3J92|1|5|G|453
3J92|1|5|U|454
3J92|1|5|C|455
3J92|1|5|C|456
*
3J92|1|5|G|700
3J92|1|5|G|701
3J92|1|5|U|702
3J92|1|5|G|703
3J92|1|5|C|704
*
3J92|1|5|G|1293
3J92|1|5|A|1294
3J92|1|5|C|1295
3J92|1|5|G|1296
3J92|1|5|U|1297
3J92|1|5|C|1298

Current chains

Chain 5

28S rRNA

Nearby chains

Chain E

eL6

Chain e

eL32

Chain f

eL33

Chain r

eL28