J3_3J92_020

3D structure

PDB id

3J92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure and assembly pathway of the ribosome quality control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

3J92|1|5|C|216, 3J92|1|5|C|217, 3J92|1|5|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J92|1|5|C|196
3J92|1|5|A|197
3J92|1|5|A|198
3J92|1|5|G|199
*
3J92|1|5|C|215
3J92|1|5|C|216
3J92|1|5|C|217
3J92|1|5|A|218
3J92|1|5|G|219
3J92|1|5|C|220
3J92|1|5|C|221
3J92|1|5|C|222
3J92|1|5|G|223
3J92|1|5|U|224
3J92|1|5|G|225
3J92|1|5|G|226
3J92|1|5|A|227
3J92|1|5|C|228
*
3J92|1|5|G|240
3J92|1|5|G|241
3J92|1|5|U|242
3J92|1|5|A|243
3J92|1|5|G|244

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

uL4

Chain Y

uL24