J3_3J9M_004

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UAAGCCUG*CAACC*GCA

Length

16 nucleotides

Bulged bases

3J9M|1|A|A|2425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9M|1|A|U|2336
3J9M|1|A|A|2337
3J9M|1|A|A|2338
3J9M|1|A|G|2339
3J9M|1|A|C|2340
3J9M|1|A|C|2341
3J9M|1|A|U|2342
3J9M|1|A|G|2343
*
3J9M|1|A|C|2423
3J9M|1|A|A|2424
3J9M|1|A|A|2425
3J9M|1|A|C|2426
3J9M|1|A|C|2427
*
3J9M|1|A|G|2436
3J9M|1|A|C|2437
3J9M|1|A|A|2438

Current chains

Chain A

16S rRNA

Nearby chains

Chain 2

bL34m

Chain 9

mL41

Chain U

uL23m

Chain s

mL65 (mS30)