J3_3J9M_007

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

3J9M|1|AA|C|868, 3J9M|1|AA|C|869

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9M|1|AA|C|677
3J9M|1|AA|U|678
3J9M|1|AA|C|679
3J9M|1|AA|U|680
*
3J9M|1|AA|A|866
3J9M|1|AA|C|867
3J9M|1|AA|C|868
3J9M|1|AA|C|869
3J9M|1|AA|C|870
3J9M|1|AA|A|871
3J9M|1|AA|G|872
*
3J9M|1|AA|C|917
3J9M|1|AA|A|918
3J9M|1|AA|A|919
3J9M|1|AA|G|920

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AJ

uS12m

Chain AO

mS40 (bS18b)