J3_3J9M_012

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

3J9M|1|AA|U|1229, 3J9M|1|AA|C|1230, 3J9M|1|AA|A|1231, 3J9M|1|AA|A|1232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9M|1|AA|U|1210
3J9M|1|AA|G|1211
3J9M|1|AA|U|1212
3J9M|1|AA|A|1213
3J9M|1|AA|A|1214
3J9M|1|AA|U|1215
3J9M|1|AA|C|1216
*
3J9M|1|AA|G|1227
3J9M|1|AA|A|1228
3J9M|1|AA|U|1229
3J9M|1|AA|C|1230
3J9M|1|AA|A|1231
3J9M|1|AA|A|1232
3J9M|1|AA|C|1233
3J9M|1|AA|C|1234
3J9M|1|AA|U|1235
3J9M|1|AA|C|1236
3J9M|1|AA|A|1237
3J9M|1|AA|C|1238
*
3J9M|1|AA|G|1351
3J9M|1|AA|C|1352
3J9M|1|AA|A|1353
3J9M|1|AA|A|1354

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AH

uS10m

Chain AK

uS14m