3D structure

PDB id
3J9M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human mitochondrial ribosome (class 1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CUAAACC*GAUGAAA*UAUAACCAAG
Length
24 nucleotides
Bulged bases
3J9M|1|A|C|1813
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J9M|1|A|C|1672
3J9M|1|A|U|1673
3J9M|1|A|A|1674
3J9M|1|A|A|1675
3J9M|1|A|A|1676
3J9M|1|A|C|1677
3J9M|1|A|C|1678
*
3J9M|1|A|G|1797
3J9M|1|A|A|1798
3J9M|1|A|U|1799
3J9M|1|A|G|1800
3J9M|1|A|A|1801
3J9M|1|A|A|1802
3J9M|1|A|A|1803
*
3J9M|1|A|U|1807
3J9M|1|A|A|1808
3J9M|1|A|U|1809
3J9M|1|A|A|1810
3J9M|1|A|A|1811
3J9M|1|A|C|1812
3J9M|1|A|C|1813
3J9M|1|A|A|1814
3J9M|1|A|A|1815
3J9M|1|A|G|1816

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
bL32m
Chain R
bL20m
Chain T
uL22m
Chain V
uL24m
Chain Y
uL29m
Chain c
mL44
Chain d
mL45
Chain i
mL51

Coloring options:

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