J3_3J9W_016

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGAUCUA*UAG*CGAAC

Length

16 nucleotides

Bulged bases

3J9W|1|BA|U|733, 3J9W|1|BA|G|839, 3J9W|1|BA|A|840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9W|1|BA|G|729
3J9W|1|BA|U|730
3J9W|1|BA|G|731
3J9W|1|BA|A|732
3J9W|1|BA|U|733
3J9W|1|BA|C|734
3J9W|1|BA|U|735
3J9W|1|BA|A|736
*
3J9W|1|BA|U|820
3J9W|1|BA|A|821
3J9W|1|BA|G|822
*
3J9W|1|BA|C|838
3J9W|1|BA|G|839
3J9W|1|BA|A|840
3J9W|1|BA|A|841
3J9W|1|BA|C|842

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B6

50S ribosomal protein bL34

Chain BD

50S ribosomal protein uL2

Chain BF

50S ribosomal protein uL4