J3_3J9W_023
3D structure
- PDB id
- 3J9W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 3J9W|1|BA|A|2547, 3J9W|1|BA|U|2548
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3J9W_023 not in the Motif Atlas
- Homologous match to J3_5J7L_046
- Geometric discrepancy: 0.1749
- The information below is about J3_5J7L_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
3J9W|1|BA|C|2546
3J9W|1|BA|A|2547
3J9W|1|BA|U|2548
3J9W|1|BA|C|2549
*
3J9W|1|BA|G|2574
3J9W|1|BA|U|2575
3J9W|1|BA|U|2576
*
3J9W|1|BA|A|2590
3J9W|1|BA|U|2591
3J9W|1|BA|U|2592
3J9W|1|BA|A|2593
3J9W|1|BA|A|2594
3J9W|1|BA|A|2595
3J9W|1|BA|G|2596
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BN
- 50S ribosomal protein uL14
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