J3_3J9W_024

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAUU*AAGUAAG*CGAGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9W|1|BA|C|2818
3J9W|1|BA|A|2819
3J9W|1|BA|U|2820
3J9W|1|BA|U|2821
*
3J9W|1|BA|A|2830
3J9W|1|BA|A|2831
3J9W|1|BA|G|2832
3J9W|1|BA|U|2833
3J9W|1|BA|A|2834
3J9W|1|BA|A|2835
3J9W|1|BA|G|2836
*
3J9W|1|BA|C|2914
3J9W|1|BA|G|2915
3J9W|1|BA|A|2916
3J9W|1|BA|G|2917
3J9W|1|BA|G|2918

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein uL3

Chain BV

50S ribosomal protein uL22