J3_3J9W_026
3D structure
- PDB id
- 3J9W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAUAG*CGC*GACG
- Length
- 13 nucleotides
- Bulged bases
- 3J9W|1|BB|G|10, 3J9W|1|BB|U|12, 3J9W|1|BB|C|106
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J9W|1|BB|C|9
3J9W|1|BB|G|10
3J9W|1|BB|A|11
3J9W|1|BB|U|12
3J9W|1|BB|A|13
3J9W|1|BB|G|14
*
3J9W|1|BB|C|66
3J9W|1|BB|G|67
3J9W|1|BB|C|68
*
3J9W|1|BB|G|104
3J9W|1|BB|A|105
3J9W|1|BB|C|106
3J9W|1|BB|G|107
Current chains
- Chain BB
- 5S ribosomal RNA
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BZ
- 50S ribosomal protein bL27
Coloring options: