J3_3J9Z_002

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAC*GAUAAGC*GAUUUC

Length

16 nucleotides

Bulged bases

3J9Z|1|LA|U|72, 3J9Z|1|LA|A|74

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Z|1|LA|G|55
3J9Z|1|LA|A|56
3J9Z|1|LA|C|57
*
3J9Z|1|LA|G|70
3J9Z|1|LA|A|71
3J9Z|1|LA|U|72
3J9Z|1|LA|A|73
3J9Z|1|LA|A|74
3J9Z|1|LA|G|75
3J9Z|1|LA|C|76
*
3J9Z|1|LA|G|110
3J9Z|1|LA|A|111
3J9Z|1|LA|U|112
3J9Z|1|LA|U|113
3J9Z|1|LA|U|114
3J9Z|1|LA|C|115

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain L3

50S ribosomal protein L34

Chain LR

50S ribosomal protein L23

Chain LW

50S ribosomal protein L29