J3_3JA1_002

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAC*GAUAAGCG*CGAUUUC

Length

18 nucleotides

Bulged bases

3JA1|1|LA|U|72, 3JA1|1|LA|A|74, 3JA1|1|LA|U|113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JA1|1|LA|G|55
3JA1|1|LA|A|56
3JA1|1|LA|C|57
*
3JA1|1|LA|G|70
3JA1|1|LA|A|71
3JA1|1|LA|U|72
3JA1|1|LA|A|73
3JA1|1|LA|A|74
3JA1|1|LA|G|75
3JA1|1|LA|C|76
3JA1|1|LA|G|77
*
3JA1|1|LA|C|109
3JA1|1|LA|G|110
3JA1|1|LA|A|111
3JA1|1|LA|U|112
3JA1|1|LA|U|113
3JA1|1|LA|U|114
3JA1|1|LA|C|115

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain L0

50S ribosomal protein L29

Chain L5

50S ribosomal protein L34

Chain LV

50S ribosomal protein L23