J3_3JA1_014
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCCGUAG*CGC*GGAAC
- Length
- 15 nucleotides
- Bulged bases
- 3JA1|1|LB|A|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JA1_014 not in the Motif Atlas
- Homologous match to J3_5J7L_049
- Geometric discrepancy: 0.2514
- The information below is about J3_5J7L_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89095.1
- Basepair signature
- cWW-F-F-F-tHS-F-cWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
3JA1|1|LB|G|10
3JA1|1|LB|C|11
3JA1|1|LB|C|12
3JA1|1|LB|G|13
3JA1|1|LB|U|14
3JA1|1|LB|A|15
3JA1|1|LB|G|16
*
3JA1|1|LB|C|68
3JA1|1|LB|G|69
3JA1|1|LB|C|70
*
3JA1|1|LB|G|106
3JA1|1|LB|G|107
3JA1|1|LB|A|108
3JA1|1|LB|A|109
3JA1|1|LB|C|110
Current chains
- Chain LB
- 5S ribosomal RNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain LQ
- 50S ribosomal protein L18
- Chain LX
- 50S ribosomal protein L25
- Chain LY
- 50S ribosomal protein L27
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