J3_3JA1_015
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GC*GGAAUAU*AGC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JA1_015 not in the Motif Atlas
- Homologous match to J3_5J7L_001
- Geometric discrepancy: 0.1677
- The information below is about J3_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_67856.4
- Basepair signature
- cWW-cWW-cSW-cWW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3JA1|1|SA|G|46
3JA1|1|SA|C|47
*
3JA1|1|SA|G|361
3JA1|1|SA|G|362
3JA1|1|SA|A|363
3JA1|1|SA|A|364
3JA1|1|SA|U|365
3JA1|1|SA|A|366
3JA1|1|SA|U|367
*
3JA1|1|SA|A|393
3JA1|1|SA|G|394
3JA1|1|SA|C|395
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain S3
- Elongation factor G
- Chain SL
- 30S ribosomal protein S12
- Chain SP
- 30S ribosomal protein S16
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