J3_3JAG_001

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

3JAG|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAG|1|5|C|112
3JAG|1|5|A|113
3JAG|1|5|G|114
3JAG|1|5|C|115
3JAG|1|5|G|116
*
3JAG|1|5|C|155
3JAG|1|5|G|156
3JAG|1|5|U|157
3JAG|1|5|A|158
3JAG|1|5|C|159
3JAG|1|5|G|160
*
3JAG|1|5|C|275
3JAG|1|5|C|276
3JAG|1|5|G|277
3JAG|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

eL8

Chain L

eL13

Chain N

eL15

Chain h

uL29

Chain i

eL36