J3_8GLP_001

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

8GLP|1|L5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GLP|1|L5|C|112
8GLP|1|L5|A|113
8GLP|1|L5|G|114
8GLP|1|L5|C|115
8GLP|1|L5|G|116
*
8GLP|1|L5|C|155
8GLP|1|L5|G|156
8GLP|1|L5|U|157
8GLP|1|L5|A|158
8GLP|1|L5|C|159
8GLP|1|L5|G|160
*
8GLP|1|L5|C|275
8GLP|1|L5|C|276
8GLP|1|L5|G|277
8GLP|1|L5|G|278

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LG

60S ribosomal protein L7a

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35

Chain Li

60S ribosomal protein L36