J3_3JAH_030
3D structure
- PDB id
- 3JAH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.45 Å
Loop
- Sequence
- CACUG*CGUGAUGG*CGAG
- Length
- 17 nucleotides
- Bulged bases
- 3JAH|1|9|U|1535, 3JAH|1|9|G|1603
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JAH_030 not in the Motif Atlas
- Homologous match to J3_4V88_041
- Geometric discrepancy: 0.1677
- The information below is about J3_4V88_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_37047.3
- Basepair signature
- cWW-cSS-cSH-F-tWH-F-cWW-cSH-F-F-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
3JAH|1|9|C|1532
3JAH|1|9|A|1533
3JAH|1|9|C|1534
3JAH|1|9|U|1535
3JAH|1|9|G|1536
*
3JAH|1|9|C|1597
3JAH|1|9|G|1598
3JAH|1|9|U|1599
3JAH|1|9|G|1600
3JAH|1|9|A|1601
3JAH|1|9|U|1602
3JAH|1|9|G|1603
3JAH|1|9|G|1604
*
3JAH|1|9|C|1635
3JAH|1|9|G|1636
3JAH|1|9|A|1637
3JAH|1|9|G|1638
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain FF
- uS7
- Chain SS
- uS13
- Chain TT
- eS19
- Chain ZZ
- eS25
Coloring options: