J3_3JAI_021
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- AGAG*CAG*CUGGAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JAI_021 not in the Motif Atlas
- Homologous match to J3_8P9A_073
- Geometric discrepancy: 0.232
- The information below is about J3_8P9A_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_97642.1
- Basepair signature
- cWW-tSH-F-F-cWW-F-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
3JAI|1|9|A|816
3JAI|1|9|G|817
3JAI|1|9|A|818
3JAI|1|9|G|819
*
3JAI|1|9|C|829
3JAI|1|9|A|830
3JAI|1|9|G|831
*
3JAI|1|9|C|843
3JAI|1|9|U|844
3JAI|1|9|G|845
3JAI|1|9|G|846
3JAI|1|9|A|847
3JAI|1|9|U|848
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain EE
- eS4
- Chain JJ
- uS4
- Chain YY
- eS24
Coloring options: