J3_3JAN_019
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCAGG*CCAGUAA*UGAUUAAG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAN|1|S2|C|1218
3JAN|1|S2|C|1219
3JAN|1|S2|A|1220
3JAN|1|S2|G|1221
3JAN|1|S2|G|1222
*
3JAN|1|S2|C|1645
3JAN|1|S2|C|1646
3JAN|1|S2|A|1647
3JAN|1|S2|G|1648
3JAN|1|S2|U|1649
3JAN|1|S2|A|1650
3JAN|1|S2|A|1651
*
3JAN|1|S2|U|1673
3JAN|1|S2|G|1674
3JAN|1|S2|A|1675
3JAN|1|S2|U|1676
3JAN|1|S2|U|1677
3JAN|1|S2|A|1678
3JAN|1|S2|A|1679
3JAN|1|S2|G|1680
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SF
- Ribosomal protein uS7
- Chain SQ
- Ribosomal protein uS9
- Chain SR
- Ribosomal protein eS17
- Chain Sc
- Ribosomal protein eS28
Coloring options: