J3_3JAN_022
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GCCCGGAC*GGGUG*UUAGAUGUC
- Length
- 22 nucleotides
- Bulged bases
- 3JAN|1|S2|G|1507, 3JAN|1|S2|U|1509
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAN|1|S2|G|1270
3JAN|1|S2|C|1271
3JAN|1|S2|C|1272
3JAN|1|S2|C|1273
3JAN|1|S2|G|1274
3JAN|1|S2|G|1275
3JAN|1|S2|A|1276
3JAN|1|S2|C|1277
*
3JAN|1|S2|G|1320
3JAN|1|S2|G|1321
3JAN|1|S2|G|1322
3JAN|1|S2|U|1323
3JAN|1|S2|G|1324
*
3JAN|1|S2|U|1504
3JAN|1|S2|U|1505
3JAN|1|S2|A|1506
3JAN|1|S2|G|1507
3JAN|1|S2|A|1508
3JAN|1|S2|U|1509
3JAN|1|S2|G|1510
3JAN|1|S2|U|1511
3JAN|1|S2|C|1512
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SK
- Ribosomal protein eS10
- Chain SM
- Ribosomal protein eS12
- Chain SP
- Ribosomal protein uS19
- Chain Sd
- Ribosomal protein uS14
- Chain Sf
- Ribosomal protein eS31
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