J3_3JAN_047
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GGUCCGCGCAGUCCGC*GCGGUGC*GACGUCGGCUAC
- Length
- 35 nucleotides
- Bulged bases
- 3JAN|1|5|G|703
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAN|1|5|G|443
3JAN|1|5|G|444
3JAN|1|5|U|445
3JAN|1|5|C|446
3JAN|1|5|C|447
3JAN|1|5|G|448
3JAN|1|5|C|449
3JAN|1|5|G|450
3JAN|1|5|C|451
3JAN|1|5|A|452
3JAN|1|5|G|453
3JAN|1|5|U|454
3JAN|1|5|C|455
3JAN|1|5|C|456
3JAN|1|5|G|457
3JAN|1|5|C|458
*
3JAN|1|5|G|698
3JAN|1|5|C|699
3JAN|1|5|G|700
3JAN|1|5|G|701
3JAN|1|5|U|702
3JAN|1|5|G|703
3JAN|1|5|C|704
*
3JAN|1|5|G|1293
3JAN|1|5|A|1294
3JAN|1|5|C|1295
3JAN|1|5|G|1296
3JAN|1|5|U|1297
3JAN|1|5|C|1298
3JAN|1|5|G|1299
3JAN|1|5|G|1300
3JAN|1|5|C|1301
3JAN|1|5|U|1302
3JAN|1|5|A|1303
3JAN|1|5|C|1304
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain E
- Ribosomal protein eL6
- Chain e
- Ribosomal protein eL32
- Chain f
- Ribosomal protein eL33
- Chain r
- Ribosomal protein eL28
Coloring options: