J3_3JBO_022

3D structure

PDB id

3JBO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UG*CAA*UCUGGUUA

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBO|1|AA|U|1633
3JBO|1|AA|G|1634
*
3JBO|1|AA|C|2124
3JBO|1|AA|A|2125
3JBO|1|AA|A|2126
*
3JBO|1|AA|U|2138
3JBO|1|AA|C|2139
3JBO|1|AA|U|2140
3JBO|1|AA|G|2141
3JBO|1|AA|G|2142
3JBO|1|AA|U|2143
3JBO|1|AA|U|2144
3JBO|1|AA|A|2145

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain AT

60S ribosomal protein eL19

Chain Aa

60S ribosomal protein eL34