J3_3JBO_027

3D structure

PDB id

3JBO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GA*UAUAUAUAAAU*AC

Length

15 nucleotides

Bulged bases

3JBO|1|AA|U|1794

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBO|1|AA|G|1780
3JBO|1|AA|A|1781
*
3JBO|1|AA|U|1790
3JBO|1|AA|A|1791
3JBO|1|AA|U|1792
3JBO|1|AA|A|1793
3JBO|1|AA|U|1794
3JBO|1|AA|A|1795
3JBO|1|AA|U|1796
3JBO|1|AA|A|1797
3JBO|1|AA|A|1798
3JBO|1|AA|A|1799
3JBO|1|AA|U|1800
*
3JBO|1|AA|A|2032
3JBO|1|AA|C|2033

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain A1

60S ribosomal protein eL27

Chain Aa

60S ribosomal protein eL34

Chain Ad

60S ribosomal protein eL38