J3_3JBO_033

3D structure

PDB id

3JBO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CAA*UUUG*UAAAG

Length

12 nucleotides

Bulged bases

3JBO|1|AA|U|3711

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBO|1|AA|C|3691
3JBO|1|AA|A|3692
3JBO|1|AA|A|3693
*
3JBO|1|AA|U|3709
3JBO|1|AA|U|3710
3JBO|1|AA|U|3711
3JBO|1|AA|G|3712
*
3JBO|1|AA|U|3779
3JBO|1|AA|A|3780
3JBO|1|AA|A|3781
3JBO|1|AA|A|3782
3JBO|1|AA|G|3783

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain A7

60S ribosomal protein eL31

Chain AE

60S ribosomal protein uL3

Chain AW

60S ribosomal protein uL22